CDS

Accession Number TCMCG057C55817
gbkey CDS
Protein Id XP_018461887.1
Location complement(join(3039..3152,3240..3344,3510..3569,3646..3784,3866..4050,4140..4223,4598..4720,4795..4974,5051..5120,5195..5291,5373..5448,5540..5629,5705..5806,5901..5972,6056..6229,6303..6373,6446..6594,6683..6749,6832..7054,7269..7360,7444..7568,7653..8314,8449..8595,8685..8798,9217..9249))
Gene LOC108832933
GeneID 108832933
Organism Raphanus sativus

Protein

Length 1117aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018606385.1
Definition PREDICTED: uncharacterized protein LOC108832933 isoform X3 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category O
Description AAA-type ATPase family protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0002090        [VIEW IN EMBL-EBI]
GO:0002092        [VIEW IN EMBL-EBI]
GO:0003008        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0007610        [VIEW IN EMBL-EBI]
GO:0007611        [VIEW IN EMBL-EBI]
GO:0007612        [VIEW IN EMBL-EBI]
GO:0007613        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010648        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023057        [VIEW IN EMBL-EBI]
GO:0030100        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044456        [VIEW IN EMBL-EBI]
GO:0044459        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045202        [VIEW IN EMBL-EBI]
GO:0045211        [VIEW IN EMBL-EBI]
GO:0045807        [VIEW IN EMBL-EBI]
GO:0048259        [VIEW IN EMBL-EBI]
GO:0048260        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050804        [VIEW IN EMBL-EBI]
GO:0050805        [VIEW IN EMBL-EBI]
GO:0050877        [VIEW IN EMBL-EBI]
GO:0050890        [VIEW IN EMBL-EBI]
GO:0051049        [VIEW IN EMBL-EBI]
GO:0051050        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051130        [VIEW IN EMBL-EBI]
GO:0051966        [VIEW IN EMBL-EBI]
GO:0051967        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060627        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0097060        [VIEW IN EMBL-EBI]
GO:0098590        [VIEW IN EMBL-EBI]
GO:0098794        [VIEW IN EMBL-EBI]
GO:0099177        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGCGAAGCTACTTTCTCAGTATTCTCAGGTAACCCTCACCGTATCATGAGGGGCCCTGTGTTCACTGTTGGTCGCCGGGGATGTGATTTATCTATCAAAGATCAATCTATGCCCAGCACCCTGTGTGAAATCAAGCAGTCTGATCACGGAGGTCCATCGCTTGCAACTTTGGAGATAACAGGGAATGGAGTTCTCGTTCAGGTGAATGGCAAGTGTTACCAGAAAAGTACTTGTGTTCACCTTCGTGGTGGTGACGAGGTCATCTTCAGCAATTTTGGCAGACATGCTTATATATTTCAACCACTTAAAGATGAAAATCTAGCTGCTCCAGACAGAGCTTCTTCAGTGAGTGTATGCGAAGCTCGAGGTGCACCTCTGAAAGGAGTTCATGTTGAGACAAGAGCAGGAGACCCCTCAGCTGCTGATGGAGCCTCTATATTAGCATCTCTATCAAAGTACCGCAACTTCCATCTCCTGCCACCAATTGCCAAATCTGCCAAAAGGCAGCAGCAAAACCCCGAGGTTCCTGTCGTACCTTCCAGCTGCAATGATTGCATCTCAGATACCGACATGAACGATGCTGATGATAGTAACAATGATCATGCTGATATTGCTTCTGTGGAGAAAACCCCTCCTTGTGCTGCCGATGAGAATCTGAACGCTGATGGCAGTGGACTGGATCCTTTCCAAGAAGCTGATGGCGGAAACCCTCCTGGTTCTGGTTTCGAAATTAGACCGATCTTGCGCCTTCTTGGGGAACCTTCTTCAATTGATATAAGGGGCATCTCCAAACTGCTGGATGAGAGAAGGGAAGTGCGAGAACTCCTTAGAGAATATGATCTTTCATCTACCATATCAACTAGACGCCAGGCGTTTAAGGATAGCCTGCAAGGAGGAATACTCAATGCTCAAGACATAGATGTTTCTTTGGAGAACTTCCCATATTTTCTAAGTGCTACGACGAAGGATGTTTTGATAGCGTCGATGTATGTCCATATGAATGGTGGAAGTAAGTTCGCTAAGTATGCATCAGACCTATCTACTACGTGTCCCCGTATCTTGCTCTCTGGACCAGCAGGCTCTGAGATATATCAGGAGATGTTGGCAAAAGCGCTTGCGAAAAGATTTGGGGCCAAATTGATGGTCGTTGACTCTCTTCTGTTGCCTGGGGGATCACCGGCCAAGGAAGCCGAATCTTCTAAAGAAGGTTCTAGGCGTGAAAGGCTCTCTATGCTTGCTAAAAGAGCTGTTCAGGCCGCACAAGCATTGCAGCAGAAGAAACCAACTTCAAGTGTGGACGCTGATATAACAGGTGGCTCAACATTGAGTTCTCAAGCTTTACCAAAGCAAGAAGTGTCAACAGCAACTTCTAAAAGTTACACATTCAAAGCAGGTGACCGAGTAAAGTATGTAGGTCCTTCATCTTCTGCTATTTCTTCTCTTCAAGGCCCACCCCTTAGGGGACCGACCATTGGTTTCCAGGGAAAAGTACTCCTTGCATTTGAAGACAACTGTTCATCTAAAGTTGGGATTAGATTCGATAGGCCTGTGCCAGATGGCAATGATCTTGGTGGCCTGTGTGAAGAGGACCACGGCTTCTTCTGTGCTGCTAGCTCACTCCGGTTAGATGGTTCTTCCAGTGATGATGCAGACAAACTCGCCGTTAATGAAGTCTTTGAGGTTGCACTTAGTGAGAGTGAAGGAGGGTCGTTAATACTGTTCCTGAAAGATATTGAGAAGTCGCTGGTTGGGAACAGTGATGTGTATGCAACCTTGAAGAGCAAGTTTGAGAATTTACCGGAAAACATTGTTGTCATGGCCTCACAAACCCAGTTGGACAGCCGAAAGGAGAAATCCCATCCTGGAGGTTTCTTGTTTACCAAGTTTGGTGGTAACCAGACGGCATTACTAGATCTTGCATTCCCGGATAATTTTAGTAAACTGCATGATAGGAGCAAAGAGACTCCTAAATCACTGAAACAGATAACTCGGCTGTTTCCTAACAAAGTCGCCATCCAATTACCTCAGGATGAGGCTTTGCTCTCGGACTGGAAGGAGAAGCTGGACCGTGATACAGAGCTTCTGAAGGTTCAGGCTAATATAAGCAGCATCCTAGCTGTCCTCACCAAAAACCGGCTGGAGTGCCCTGACCTTGGAACCATGTGCATCAAAGATCAAACCCTTCCTCCTGAAAGTGTTGAGAAAGTGGTTGGCTGGGCTTTAAGCCACCATCTTATGAACTGCGCAGAACCCACAGTCAAAGACAACAAACTTGTTATCTCAGCAGAAAGCATTACATATGGCCTGCAGATGTTACATGGGGTTCAGGACGAAAACAAGAGTCTGAAGAAATCCCTCAAGGATGTTGTGACAGAGAACGAGTTTGAGAAAAAACTCTTATCAGATGTCATCCCCCCTAGCGATATAGGTGTGTCCTTTGATGATATTGGGGCTCTGGAGAATGTGAAAGACACACTTAAGGAGTTGGTGATGCTTCCTCTTCAAAGACCTGAGTTGTTTGACAAAGGCCAGCTAACTAAGCCTACGAAAGGTATTCTGTTGTTTGGACCACCTGGTACCGGAAAGACAATGCTGGCAAAGGCAGTAGCAACTGAAGCTGGCGCAAACTTCATCAATATCTCAATGTCCAGCATTACTTCAAAGTGGTTTGGTGAGGGAGAGAAGTATGTTAAAGCTGTCTTCTCTTTAGCAAGCAAGATCGCTCCAAGTGTCATTTTTGTTGATGAGGTGGATAGCATGTTGGGAAGACGTGAGAATCCAGGGGAACATGAAGCTATGCGTAAGATGAAGAACGAGTTCATGGTAAACTGGGACGGTTTAAGAACAAAGGATAGAGAACGAGTTCTGGTCCTCGCTGCTACCAACAGACCATTTGACCTCGACGAAGCAGTTATTAGACGGCTTCCCCGGAGATTGATGGTGAATCTTCCAGATGCGACCAACAGATCAAAGATCTTGAGCGTTATTCTTTCTAAAGAAGAAATAGCACCTGATGTTGATTTAGAAGCGATTGCAAATATGACAGATGGCTACTCAGGAAGTGACTTAAAGAATCTTTGTGTAACTGCTGCTCATCTTCCAATTCGAGAAATACTGGAGAAAGAAAAGAAGGAAAAAACTGCAGCTGAGGCTGAGAACCGTCCAACGCCTCCATTGTATAGCTGCACAGACATTCGTCCACTGACAATGGCAGATTTCAAGGCTGCCCATGAACAGGTATGTGCTAGTGTGTCTACGGACTCATCGAACATGAACGAGCTTCAGCAGTGGAACGAGCTGTACGGAGAAGGTGGGTCAAGGAAGAAGACGTCCTTGAGCTACTTTATGTAG
Protein:  
MGEATFSVFSGNPHRIMRGPVFTVGRRGCDLSIKDQSMPSTLCEIKQSDHGGPSLATLEITGNGVLVQVNGKCYQKSTCVHLRGGDEVIFSNFGRHAYIFQPLKDENLAAPDRASSVSVCEARGAPLKGVHVETRAGDPSAADGASILASLSKYRNFHLLPPIAKSAKRQQQNPEVPVVPSSCNDCISDTDMNDADDSNNDHADIASVEKTPPCAADENLNADGSGLDPFQEADGGNPPGSGFEIRPILRLLGEPSSIDIRGISKLLDERREVRELLREYDLSSTISTRRQAFKDSLQGGILNAQDIDVSLENFPYFLSATTKDVLIASMYVHMNGGSKFAKYASDLSTTCPRILLSGPAGSEIYQEMLAKALAKRFGAKLMVVDSLLLPGGSPAKEAESSKEGSRRERLSMLAKRAVQAAQALQQKKPTSSVDADITGGSTLSSQALPKQEVSTATSKSYTFKAGDRVKYVGPSSSAISSLQGPPLRGPTIGFQGKVLLAFEDNCSSKVGIRFDRPVPDGNDLGGLCEEDHGFFCAASSLRLDGSSSDDADKLAVNEVFEVALSESEGGSLILFLKDIEKSLVGNSDVYATLKSKFENLPENIVVMASQTQLDSRKEKSHPGGFLFTKFGGNQTALLDLAFPDNFSKLHDRSKETPKSLKQITRLFPNKVAIQLPQDEALLSDWKEKLDRDTELLKVQANISSILAVLTKNRLECPDLGTMCIKDQTLPPESVEKVVGWALSHHLMNCAEPTVKDNKLVISAESITYGLQMLHGVQDENKSLKKSLKDVVTENEFEKKLLSDVIPPSDIGVSFDDIGALENVKDTLKELVMLPLQRPELFDKGQLTKPTKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDRERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDATNRSKILSVILSKEEIAPDVDLEAIANMTDGYSGSDLKNLCVTAAHLPIREILEKEKKEKTAAEAENRPTPPLYSCTDIRPLTMADFKAAHEQVCASVSTDSSNMNELQQWNELYGEGGSRKKTSLSYFM